ENSDARG00000042138


Danio rerio

Features
Gene ID: ENSDARG00000042138
  
Biological name :selp
  
Synonyms : selectin P / selp
  
Possible biological names infered from orthology : P14151 / P16109 / P18337 / Q01102 / selectin L / selectin, lymphocyte / selectin, platelet / SELL
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 33948642
Gene end: 33961697
  
Corresponding Affymetrix probe sets: Dr.12252.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000061764
Ensembl peptide - ENSDARP00000115465
NCBI entrez gene - 796481     See in Manteia.
RefSeq - XM_021468527
RefSeq - NM_001243323
RefSeq Peptide - NP_001230252
swissprot - F1QA53
swissprot - E5DV48
ZFIN ID - ZDB-GENE-110107-2
Ensembl - ENSDARG00000042138
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000002643Gallus gallus
 SELLENSG00000188404Homo sapiens
 SELPENSG00000174175Homo sapiens
 SellENSMUSG00000026581Mus musculus
 SelpENSMUSG00000026580Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sele / selectin E / P16581* / selectin, endothelial cell*ENSDARG0000000912328
cfh / complement factor HENSDARG0000010044214
cfhl1 / complement factor H like 1ENSDARG0000010521213
selp / selectin PENSDARG0000009678711
cfhl3 / complement factor H like 3ENSDARG0000010420511
cfhl2 / complement factor H like 2ENSDARG0000010376010
rca2.1 / regulator of complement activation group 2 gene 1 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG000000560758
rca2.2 / regulator of complement activation group 2 gene 2 / CD46* / C4bp* / CD55* / Zp3r* / C4BPA* / Cd55b* / P08607* / P15529* / Q61475* / O88174* / P04003* / P08174* / CD46 molecule* / C...ENSDARG000000955127
ntd5 / ntl-dependent gene 5ENSDARG000000409446
cfhl4 / complement factor H like 4ENSDARG000001024566
cfhl5 / complement factor H like 5ENSDARG000001050525
si:ch73-217n20.1ENSDARG000000915845
f13b / coagulation factor XIII, B polypeptideENSDARG000001013532


Protein motifs (from Interpro)
Interpro ID Name
 IPR000436  Sushi/SCR/CCP domain
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR002396  Selectin superfamily
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033991  Selectin, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0030097 hemopoiesis IMP
 biological_processGO:0035701 hematopoietic stem cell migration IMP
 biological_processGO:0097241 hematopoietic stem cell migration to bone marrow IMP
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Cell surface interactions at the vascular wall
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000105023 selplg / selectin P ligand / Q14242*  / complex / reaction






 

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