ENSDARG00000098141


Danio rerio

Features
Gene ID: ENSDARG00000098141
  
Biological name :supt3h
  
Synonyms : SPT3 homolog, SAGA and STAGA complex component / supt3h
  
Possible biological names infered from orthology : O75486 / Supt3
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 5158439
Gene end: 5426458
  
Corresponding Affymetrix probe sets: Dr.14718.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000132745
Ensembl peptide - ENSDARP00000150750
Ensembl peptide - ENSDARP00000139016
Ensembl peptide - ENSDARP00000137793
NCBI entrez gene - 436898     See in Manteia.
swissprot - A0A0R4IUQ0
swissprot - A0A0R4IR35
swissprot - A0A0R4IFX5
swissprot - Q6DHL1
ZFIN ID - ZDB-GENE-040718-370
Ensembl - ENSDARG00000098141
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUPT3HENSGALG00000016705Gallus gallus
 O75486ENSG00000196284Homo sapiens
 Supt3ENSMUSG00000038954Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr