ENSGALG00000016705


Gallus gallus

Features
Gene ID: ENSGALG00000016705
  
Biological name :SUPT3H
  
Synonyms : SPT3 homolog, SAGA and STAGA complex component / SUPT3H
  
Possible biological names infered from orthology : O75486 / Supt3
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 109538307
Gene end: 109811858
  
Corresponding Affymetrix probe sets: Gga.18337.1.S1_at (Chicken Array)   Gga.18820.1.S1_s_at (Chicken Array)   GgaAffx.10689.1.S1_s_at (Chicken Array)   GgaAffx.10689.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046236
Ensembl peptide - ENSGALP00000026908
NCBI entrez gene - 422053     See in Manteia.
RefSeq - XM_015285141
RefSeq - NM_001031102
RefSeq - XM_015285138
RefSeq - XM_015285139
RefSeq - XM_015285140
RefSeq - XM_015285137
RefSeq Peptide - NP_001026273
swissprot - Q5ZIW0
swissprot - A0A1D5P0Q8
Ensembl - ENSGALG00000016705
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 supt3hENSDARG00000098141Danio rerio
 O75486ENSG00000196284Homo sapiens
 Supt3ENSMUSG00000038954Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0016573 histone acetylation IBA
 biological_processGO:0016578 histone deubiquitination IEA
 biological_processGO:0043966 histone H3 acetylation IEA
 cellular_componentGO:0000124 SAGA complex IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0004402 histone acetyltransferase activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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