ENSG00000196284


Homo sapiens

Features
Gene ID: ENSG00000196284
  
Biological name :SUPT3H
  
Synonyms : O75486 / SPT3 homolog, SAGA and STAGA complex component / SUPT3H
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p21.1
Gene start: 44809317
Gene end: 45377953
  
Corresponding Affymetrix probe sets: 206506_s_at (Human Genome U133 Plus 2.0 Array)   211106_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000490652
Ensembl peptide - ENSP00000360514
Ensembl peptide - ENSP00000360515
Ensembl peptide - ENSP00000436411
Ensembl peptide - ENSP00000360513
NCBI entrez gene - 8464     See in Manteia.
OMIM - 602947
RefSeq - XM_017011374
RefSeq - XM_011514952
RefSeq - XM_011514953
RefSeq - XM_011514954
RefSeq - XM_017011369
RefSeq - XM_017011370
RefSeq - XM_017011371
RefSeq - XM_017011372
RefSeq - XM_017011373
RefSeq - NM_001261823
RefSeq - NM_003599
RefSeq - NM_181356
RefSeq - XM_011514949
RefSeq - XM_011514950
RefSeq - XM_011514951
RefSeq Peptide - NP_852001
RefSeq Peptide - NP_001248752
RefSeq Peptide - NP_001337258
RefSeq Peptide - NP_003590
swissprot - B4E1H0
swissprot - O75486
swissprot - Q5VWT9
swissprot - A0A024RD67
Ensembl - ENSG00000196284
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 supt3hENSDARG00000098141Danio rerio
 SUPT3HENSGALG00000016705Gallus gallus
 Supt3ENSMUSG00000038954Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003195  Transcription initiation factor IID, subunit 13
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0016578 histone deubiquitination IDA
 biological_processGO:0043966 histone H3 acetylation IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated NAS
 cellular_componentGO:0000124 SAGA complex IBA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0030914 STAGA complex IDA
 cellular_componentGO:0033276 transcription factor TFTC complex IDA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0004402 histone acetyltransferase activity IDA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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