ENSDARG00000098295


Danio rerio

Features
Gene ID: ENSDARG00000098295
  
Biological name :efna3b
  
Synonyms : efna3b / ephrin-A3b
  
Possible biological names infered from orthology : AL691442.1 / EFNA3 / ephrin A3 / O08545 / P52797
  
Species: Danio rerio
  
Chr. number: 16
Strand: 1
Band:
Gene start: 23087326
Gene end: 23189883
  
Corresponding Affymetrix probe sets: Dr.12387.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134568
Ensembl peptide - ENSDARP00000133669
NCBI entrez gene - 117506     See in Manteia.
RefSeq - NM_131854
RefSeq Peptide - NP_571929
swissprot - A0A0R4IKS6
swissprot - Q90YC5
ZFIN ID - ZDB-GENE-011108-1
Ensembl - ENSDARG00000098295
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AL691442.1ENSG00000251246Homo sapiens
 EFNA3ENSG00000143590Homo sapiens
 Efna3ENSMUSG00000028039Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
efna3a / ephrin-A3a / EFNA3* / O08545* / P52797* / ephrin A3* / AL691442.1*ENSDARG0000001467578
efna1a / ephrin-A1a / EFNA1* / P20827* / P52793* / ephrin A1* / Ephrin-A1 Ephrin-A1, secreted form*ENSDARG0000003032639
efna1b / ephrin-A1b / EFNA1* / P20827* / P52793* / ephrin A1* / Ephrin-A1 Ephrin-A1, secreted form*ENSDARG0000001878737
P79727 / efna2a / ephrin-A2a / EFNA2* / O43921* / P52801* / ephrin A2*ENSDARG0000003137236
efna2b / ephrin-A2b / EFNA2* / P52801* / O43921* / ephrin A2*ENSDARG0000007974034
efna5a / ephrin-A5a / EFNA5* / P52803* / O08543* / ephrin A5*ENSDARG0000008979034
si:dkey-246i14.3 / EFNA4* / O08542* / P52798* / ephrin A4*ENSDARG0000009042730


Protein motifs (from Interpro)
Interpro ID Name
 IPR001799  Ephrin receptor-binding domain
 IPR008972  Cupredoxin
 IPR019765  Ephrin, conserved site
 IPR031328  Ephrin
 IPR034252  Ephrin-A ectodomain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007411 axon guidance IBA
 biological_processGO:0048013 ephrin receptor signaling pathway IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0046875 ephrin receptor binding IBA


Pathways (from Reactome)
Pathway description
EPH-Ephrin signaling
EPHA-mediated growth cone collapse
EPH-ephrin mediated repulsion of cells


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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