ENSDARG00000098432


Danio rerio

Features
Gene ID: ENSDARG00000098432
  
Biological name :paf1
  
Synonyms : paf1 / PAF1 homolog, Paf1/RNA polymerase II complex component
  
Possible biological names infered from orthology : Q8K2T8 / Q8N7H5 / RNA polymerase II-associated factor 1 homolog
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 47618221
Gene end: 47623452
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132235
swissprot - A0A0R4IFZ2
ZFIN ID - ZDB-GENE-050506-101
Ensembl - ENSDARG00000098432
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PAF1ENSGALG00000037879Gallus gallus
 PAF1ENSG00000006712Homo sapiens
 Paf1ENSMUSG00000003437Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007133  RNA polymerase II associated factor Paf1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter IEA
 biological_processGO:0016570 histone modification IEA
 cellular_componentGO:0016593 Cdc73/Paf1 complex IEA


Pathways (from Reactome)
Pathway description
Formation of RNA Pol II elongation complex
RNA Polymerase II Pre-transcription Events
RNA Polymerase II Transcription Elongation
E3 ubiquitin ligases ubiquitinate target proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000112 gut gut quality , abnormal
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 ZFA:0000123 liver liver quality , abnormal
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 ZFA:0001114 head head quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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