ENSDARG00000098574


Danio rerio

Features
Gene ID: ENSDARG00000098574
  
Biological name :srsf11
  
Synonyms : serine/arginine-rich splicing factor 11 / srsf11
  
Possible biological names infered from orthology : Q05519 / serine and arginine rich splicing factor 11
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 45388126
Gene end: 45400146
  
Corresponding Affymetrix probe sets: Dr.20792.1.S1_at (Zebrafish Array)   NM_199576_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134255
Ensembl peptide - ENSDARP00000139328
Ensembl peptide - ENSDARP00000138275
NCBI entrez gene - 321886     See in Manteia.
RefSeq - NM_199576
RefSeq Peptide - NP_955870
swissprot - A0A0R4IX38
swissprot - A0A0R4IUB5
swissprot - A0A0R4IHS9
ZFIN ID - ZDB-GENE-030131-605
Ensembl - ENSDARG00000098574
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SRSF11ENSGALG00000011305Gallus gallus
 Q05519ENSG00000116754Homo sapiens
 Srsf11ENSMUSG00000055436Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
srek1 / splicing regulatory glutamine/lysine-rich protein 1 / Q8BZX4* / Q8WXA9* / splicing regulatory glutamic acid and lysine rich protein 1*ENSDARG0000000976441


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034447  Serine/arginine-rich splicing factor 11


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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