ENSG00000116754


Homo sapiens

Features
Gene ID: ENSG00000116754
  
Biological name :SRSF11
  
Synonyms : Q05519 / serine and arginine rich splicing factor 11 / SRSF11
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p31.1
Gene start: 70205682
Gene end: 70253052
  
Corresponding Affymetrix probe sets: 200685_at (Human Genome U133 Plus 2.0 Array)   200686_s_at (Human Genome U133 Plus 2.0 Array)   213742_at (Human Genome U133 Plus 2.0 Array)   236948_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000474149
Ensembl peptide - ENSP00000378568
Ensembl peptide - ENSP00000474372
Ensembl peptide - ENSP00000359987
Ensembl peptide - ENSP00000359988
Ensembl peptide - ENSP00000359989
NCBI entrez gene - 9295     See in Manteia.
OMIM - 602010
RefSeq - XM_017002834
RefSeq - NM_001190987
RefSeq - NM_001350605
RefSeq - NM_001350606
RefSeq - NM_001350607
RefSeq - NM_001350608
RefSeq - NM_001350609
RefSeq - NM_004768
RefSeq - XM_017002822
RefSeq - XM_017002823
RefSeq - XM_017002824
RefSeq - XM_017002825
RefSeq - XM_017002826
RefSeq - XM_017002827
RefSeq - XM_017002828
RefSeq - XM_017002829
RefSeq - XM_017002830
RefSeq - XM_017002831
RefSeq - XM_017002832
RefSeq - XM_017002833
RefSeq - XM_005271338
RefSeq - XM_005271339
RefSeq - XM_011542427
RefSeq - XM_011542428
RefSeq - XM_011542431
RefSeq - XM_017002811
RefSeq - XM_017002812
RefSeq - XM_017002813
RefSeq - XM_017002814
RefSeq - XM_017002815
RefSeq - XM_017002816
RefSeq - XM_017002817
RefSeq - XM_017002818
RefSeq - XM_017002819
RefSeq - XM_017002820
RefSeq - XM_017002821
RefSeq Peptide - NP_001177916
RefSeq Peptide - NP_001337534
RefSeq Peptide - NP_001337535
RefSeq Peptide - NP_001337536
RefSeq Peptide - NP_001337537
RefSeq Peptide - NP_001337538
RefSeq Peptide - NP_004759
swissprot - Q05519
swissprot - Q5T757
swissprot - Q5T760
swissprot - S4R3C4
swissprot - B4DWT1
Ensembl - ENSG00000116754
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf11ENSDARG00000098574Danio rerio
 SRSF11ENSGALG00000011305Gallus gallus
 Srsf11ENSMUSG00000055436Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SREK1 / Q8WXA9 / splicing regulatory glutamic acid and lysine rich protein 1ENSG0000015391448


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034447  Serine/arginine-rich splicing factor 11
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006369 termination of RNA polymerase II transcription TAS
 biological_processGO:0006397 mRNA processing TAS
 biological_processGO:0006405 RNA export from nucleus TAS
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0031124 mRNA 3"-end processing TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0016607 nuclear speck IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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