ENSMUSG00000055436


Mus musculus

Features
Gene ID: ENSMUSG00000055436
  
Biological name :Srsf11
  
Synonyms : serine/arginine-rich splicing factor 11 / Srsf11
  
Possible biological names infered from orthology : Q05519 / serine and arginine rich splicing factor 11
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: H4
Gene start: 158010473
Gene end: 158036639
  
Corresponding Affymetrix probe sets: 10503036 (MoGene1.0st)   1427269_at (Mouse Genome 430 2.0 Array)   1430077_at (Mouse Genome 430 2.0 Array)   1439095_at (Mouse Genome 430 2.0 Array)   1452371_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115487
Ensembl peptide - ENSMUSP00000114370
Ensembl peptide - ENSMUSP00000118767
Ensembl peptide - ENSMUSP00000142759
Ensembl peptide - ENSMUSP00000122686
Ensembl peptide - ENSMUSP00000063916
Ensembl peptide - ENSMUSP00000072651
Ensembl peptide - ENSMUSP00000113685
NCBI entrez gene - 69207     See in Manteia.
MGI - MGI:1916457
RefSeq - XM_017319711
RefSeq - NM_001093752
RefSeq - NM_001093753
RefSeq - XM_006502015
RefSeq - XM_006502016
RefSeq - XM_006502020
RefSeq - XM_006502022
RefSeq - XM_011240219
RefSeq - XM_017319708
RefSeq - XM_017319709
RefSeq - XM_017319710
RefSeq Peptide - NP_001087221
RefSeq Peptide - NP_001087222
swissprot - F6RDI8
swissprot - F6TN80
swissprot - F6X2U6
swissprot - E9Q6E5
swissprot - Q3UIX4
swissprot - A0A0G2JEG1
swissprot - D3Z4B0
swissprot - D6RE22
Ensembl - ENSMUSG00000055436
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 srsf11ENSDARG00000098574Danio rerio
 SRSF11ENSGALG00000011305Gallus gallus
 Q05519ENSG00000116754Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Srek1 / Q8BZX4 / Splicing regulatory glutamine/lysine-rich protein 1 / Q8WXA9* / splicing regulatory glutamic acid and lysine rich protein 1*ENSMUSG0000003262131


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034447  Serine/arginine-rich splicing factor 11
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Cleavage of Growing Transcript in the Termination Region
Transport of Mature mRNA derived from an Intron-Containing Transcript
mRNA Splicing - Major Pathway
mRNA 3-end processing


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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