ENSDARG00000099108


Danio rerio

Features
Gene ID: ENSDARG00000099108
  
Biological name :clic6
  
Synonyms : chloride intracellular channel 6 / clic6
  
Possible biological names infered from orthology : Chloride intracellular channel protein 6 / Q8BHB9 / Q96NY7
  
Species: Danio rerio
  
Chr. number: 1
Strand: -1
Band:
Gene start: 1618994
Gene end: 1631399
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000135191
Ensembl peptide - ENSDARP00000144458
swissprot - A0A286YBT4
swissprot - R4GEX1
ZFIN ID - ZDB-GENE-121214-172
Ensembl - ENSDARG00000099108
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC6ENSGALG00000016020Gallus gallus
 CLIC6ENSG00000159212Homo sapiens
 Clic6ENSMUSG00000022949Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic4 / chloride intracellular channel 4 / Q9QYB1* / Q9Y696* / Chloride intracellular channel protein 4 *ENSDARG0000002299569
clic5b / chloride intracellular channel 5b / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007058468
clic5a / chloride intracellular channel 5a / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007599368
clic1 / chloride intracellular channel 1 / O00299*ENSDARG0000010334063
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477659
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062556


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold
 IPR030264  Chloride intracellular channel protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism anterior-posterior axis curved , abnormal
Show

 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

 ZFA:0001617 otolith otolith morphology , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr