ENSDARG00000022995


Danio rerio

Features
Gene ID: ENSDARG00000022995
  
Biological name :clic4
  
Synonyms : chloride intracellular channel 4 / clic4
  
Possible biological names infered from orthology : Chloride intracellular channel protein 4 / Q9QYB1 / Q9Y696
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 25444323
Gene end: 25480375
  
Corresponding Affymetrix probe sets: Dr.20376.1.S1_at (Zebrafish Array)   NM_201486_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000035859
Ensembl peptide - ENSDARP00000124431
NCBI entrez gene - 368255     See in Manteia.
RefSeq - NM_201486
RefSeq Peptide - NP_958894
swissprot - F8W3B6
swissprot - Q7ZTT4
ZFIN ID - ZDB-GENE-030326-3
Ensembl - ENSDARG00000022995
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC4ENSGALG00000001262Gallus gallus
 CLIC4ENSG00000169504Homo sapiens
 Clic4ENSMUSG00000037242Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic5b / chloride intracellular channel 5b / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007058477
clic5a / chloride intracellular channel 5a / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007599373
clic6 / chloride intracellular channel 6 / Q8BHB9* / Q96NY7* / Chloride intracellular channel protein 6 *ENSDARG0000009910869
clic1 / chloride intracellular channel 1 / O00299*ENSDARG0000010334067
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477660
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062556


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr