ENSDARG00000075993


Danio rerio

Features
Gene ID: ENSDARG00000075993
  
Biological name :clic5a
  
Synonyms : chloride intracellular channel 5a / clic5a
  
Possible biological names infered from orthology : chloride intracellular channel 5 / Chloride intracellular channel protein 5 / CLIC5 / Q8BXK9 / Q9NZA1
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 5566138
Gene end: 5583345
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000030813
NCBI entrez gene - 492513     See in Manteia.
RefSeq - NM_001007385
RefSeq Peptide - NP_001007386
swissprot - Q5U3P5
ZFIN ID - ZDB-GENE-041114-84
Ensembl - ENSDARG00000075993
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC5ENSGALG00000016707Gallus gallus
 CLIC5ENSG00000112782Homo sapiens
 Clic5ENSMUSG00000023959Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic5b / chloride intracellular channel 5b / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007058482
clic4 / chloride intracellular channel 4 / Q9QYB1* / Q9Y696* / Chloride intracellular channel protein 4 *ENSDARG0000002299575
clic6 / chloride intracellular channel 6 / Q8BHB9* / Q96NY7* / Chloride intracellular channel protein 6 *ENSDARG0000009910870
clic1 / chloride intracellular channel 1 / O00299*ENSDARG0000010334066
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477663
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062559


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold
 IPR030264  Chloride intracellular channel protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007605 sensory perception of sound IBA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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