ENSG00000112782


Homo sapiens

Features
Gene ID: ENSG00000112782
  
Biological name :CLIC5
  
Synonyms : chloride intracellular channel 5 / CLIC5 / Q9NZA1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p21.1
Gene start: 45880827
Gene end: 46080348
  
Corresponding Affymetrix probe sets: 213317_at (Human Genome U133 Plus 2.0 Array)   217628_at (Human Genome U133 Plus 2.0 Array)   219866_at (Human Genome U133 Plus 2.0 Array)   234329_at (Human Genome U133 Plus 2.0 Array)   243917_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496359
Ensembl peptide - ENSP00000185206
Ensembl peptide - ENSP00000344165
Ensembl peptide - ENSP00000493894
Ensembl peptide - ENSP00000495186
Ensembl peptide - ENSP00000439195
NCBI entrez gene - 53405     See in Manteia.
OMIM - 607293
RefSeq - XM_017010953
RefSeq - NM_001114086
RefSeq - NM_001256023
RefSeq - NM_016929
RefSeq - XM_011514692
RefSeq - XM_011514694
RefSeq Peptide - NP_001107558
RefSeq Peptide - NP_001242952
RefSeq Peptide - NP_058625
swissprot - Q53G01
swissprot - Q9NZA1
Ensembl - ENSG00000112782
  
Related genetic diseases (OMIM): 616042 - ?Deafness, autosomal recessive 103, 616042
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clic5aENSDARG00000075993Danio rerio
 clic5bENSDARG00000070584Danio rerio
 CLIC5ENSGALG00000016707Gallus gallus
 Clic5ENSMUSG00000023959Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLIC6 / Q96NY7 / chloride intracellular channel 6ENSG0000015921250
CLIC4 / Q9Y696 / chloride intracellular channel 4ENSG0000016950445
CLIC2 / O15247 / chloride intracellular channel 2ENSG0000015596238
CLIC1 / O00299 / chloride intracellular channel 1ENSG0000021371937
CLIC3 / O95833 / chloride intracellular channel 3ENSG0000016958329


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR030264  Chloride intracellular channel protein 5
 IPR036249  Thioredoxin-like superfamily
 IPR036282  Glutathione S-transferase, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IDA
 biological_processGO:0007565 female pregnancy TAS
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0060088 auditory receptor cell stereocilium organization IBA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005938 cell cortex IEA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0008568 Vestibular areflexia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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