ENSG00000155962


Homo sapiens

Features
Gene ID: ENSG00000155962
  
Biological name :CLIC2
  
Synonyms : chloride intracellular channel 2 / CLIC2 / O15247
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q28
Gene start: 155276211
Gene end: 155334657
  
Corresponding Affymetrix probe sets: 213415_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000318558
Ensembl peptide - ENSP00000358460
NCBI entrez gene - 1193     See in Manteia.
OMIM - 300138
RefSeq - NM_001289
RefSeq Peptide - NP_001280
swissprot - A6PVS0
swissprot - O15247
Ensembl - ENSG00000155962
  
Related genetic diseases (OMIM): 300886 - ?Mental retardation, X-linked, syndromic 32, 300886
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clic2ENSDARG00000010625Danio rerio
 CLIC2ENSGALG00000029502Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CLIC6 / Q96NY7 / chloride intracellular channel 6ENSG0000015921264
CLIC4 / Q9Y696 / chloride intracellular channel 4ENSG0000016950464
CLIC5 / Q9NZA1 / chloride intracellular channel 5ENSG0000011278263
CLIC1 / O00299 / chloride intracellular channel 1ENSG0000021371959
CLIC3 / O95833 / chloride intracellular channel 3ENSG0000016958348


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR030253  Chloride intracellular channel protein 2
 IPR036249  Thioredoxin-like superfamily
 IPR036282  Glutathione S-transferase, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0010880 regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum IDA
 biological_processGO:0010881 regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion IC
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0051099 positive regulation of binding IDA
 biological_processGO:0060315 negative regulation of ryanodine-sensitive calcium-release channel activity IEA
 biological_processGO:0098869 cellular oxidant detoxification IEA
 biological_processGO:1902476 chloride transmembrane transport IEA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0004602 glutathione peroxidase activity IDA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels
Ion homeostasis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000053 Macroorchidism "The presence of abnormally large testes." [HPO:curators]
Show

 HP:0000238 Hydrocephalus 
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 HP:0000400 Large ears 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001635 Congestive heart failure "The presence of an abnormality of cardiac function that is responsible for the failure of the heart to pump blood at a rate that is commensurate with the needs of the tissues or a state in which abnormally elevated filling pressures are required for the heart to do so. Heart failure is frequently related to a defect in myocardial contraction." [HPO:curators]
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 HP:0001640 Cardiomegaly 
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0004749 Atrial fibrillation or flutter 
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 HP:0005781 Contractures of the large joints 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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