ENSDARG00000070584


Danio rerio

Features
Gene ID: ENSDARG00000070584
  
Biological name :clic5b
  
Synonyms : chloride intracellular channel 5b / clic5b
  
Possible biological names infered from orthology : chloride intracellular channel 5 / Chloride intracellular channel protein 5 / CLIC5 / Q8BXK9 / Q9NZA1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 43925266
Gene end: 43968859
  
Corresponding Affymetrix probe sets: Dr.12286.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000029090
Ensembl peptide - ENSDARP00000091344
NCBI entrez gene - 405833     See in Manteia.
swissprot - A2CEF5
swissprot - F1R0L7
ZFIN ID - ZDB-GENE-040426-2542
Ensembl - ENSDARG00000070584
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLIC5ENSGALG00000016707Gallus gallus
 CLIC5ENSG00000112782Homo sapiens
 Clic5ENSMUSG00000023959Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clic5a / chloride intracellular channel 5a / CLIC5* / Q9NZA1* / Q8BXK9* / chloride intracellular channel 5* / Chloride intracellular channel protein 5 *ENSDARG0000007599349
clic4 / chloride intracellular channel 4 / Q9QYB1* / Q9Y696* / Chloride intracellular channel protein 4 *ENSDARG0000002299548
clic6 / chloride intracellular channel 6 / Q8BHB9* / Q96NY7* / Chloride intracellular channel protein 6 *ENSDARG0000009910842
clic1 / chloride intracellular channel 1 / O00299*ENSDARG0000010334040
clic2 / chloride intracellular channel 2 / O15247*ENSDARG0000001062537
clic3 / chloride intracellular channel 3 / O95833* / Q9D7P7* / Chloride intracellular channel protein 3 *ENSDARG0000004477636


Protein motifs (from Interpro)
Interpro ID Name
 IPR002946  Intracellular chloride channel
 IPR004045  Glutathione S-transferase, N-terminal
 IPR010987  Glutathione S-transferase, C-terminal-like
 IPR012336  Thioredoxin-like fold
 IPR030264  Chloride intracellular channel protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0007605 sensory perception of sound IBA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0034707 chloride channel complex IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005254 chloride channel activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr