ENSDARG00000099619


Danio rerio

Features
Gene ID: ENSDARG00000099619
  
Biological name :CABZ01083166.1
  
Synonyms : CABZ01083166.1
  
Possible biological names infered from orthology : general transcription factor IIIC subunit 1 / GTF3C1 / Q12789 / Q8K284 / ral transcription factor 3C polypeptide 1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 58990121
Gene end: 59000239
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132798
swissprot - A0A0G2KKD5
Ensembl - ENSDARG00000099619
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GTF3C1ENSGALG00000007387Gallus gallus
 GTF3C1ENSG00000077235Homo sapiens
 Gtf3c1ENSMUSG00000032777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CABZ01052576.1ENSDARG000001020916


Protein motifs (from Interpro)
Interpro ID Name
 IPR007309  B-block binding subunit of TFIIIC
 IPR035625  Tfc3, extended winged-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0009304 tRNA transcription IBA
 biological_processGO:0042791 5S class rRNA transcription by RNA polymerase III IBA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IBA
 molecular_functionGO:0000995 RNA polymerase III general transcription initiation factor activity IBA
 molecular_functionGO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001007 obsolete transcription factor activity, RNA polymerase III transcription factor binding IBA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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