ENSGALG00000007387


Gallus gallus

Features
Gene ID: ENSGALG00000007387
  
Biological name :GTF3C1
  
Synonyms : general transcription factor IIIC subunit 1 / GTF3C1
  
Possible biological names infered from orthology : Q12789 / Q8K284 / ral transcription factor 3C polypeptide 1
  
Species: Gallus gallus
  
Chr. number: 14
Strand: 1
Band:
Gene start: 11999148
Gene end: 12037184
  
Corresponding Affymetrix probe sets: GgaAffx.5574.1.S1_at (Chicken Array)   GgaAffx.5574.2.S1_at (Chicken Array)   GgaAffx.5574.2.S1_s_at (Chicken Array)   GgaAffx.5574.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011931
NCBI entrez gene - 416646     See in Manteia.
RefSeq - XM_004945344
RefSeq - XM_015294597
swissprot - E1C6U4
Ensembl - ENSGALG00000007387
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01083166.1ENSDARG00000099619Danio rerio
 GTF3C1ENSG00000077235Homo sapiens
 Gtf3c1ENSMUSG00000032777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007309  B-block binding subunit of TFIIIC


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006359 regulation of transcription by RNA polymerase III IEA
 biological_processGO:0006384 transcription initiation from RNA polymerase III promoter IBA
 biological_processGO:0009304 tRNA transcription IBA
 biological_processGO:0042791 5S class rRNA transcription by RNA polymerase III IBA
 cellular_componentGO:0000127 transcription factor TFIIIC complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000995 RNA polymerase III general transcription initiation factor activity IBA
 molecular_functionGO:0001002 RNA polymerase III type 1 promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001003 RNA polymerase III type 2 promoter sequence-specific DNA binding IBA
 molecular_functionGO:0001007 obsolete transcription factor activity, RNA polymerase III transcription factor binding IBA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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