ENSDARG00000100505


Danio rerio

Features
Gene ID: ENSDARG00000100505
  
Biological name :ddx52
  
Synonyms : ddx52 / DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
  
Possible biological names infered from orthology : DExD-box helicase 52 / Probable ATP-dependent RNA helicase DDX52 / Q8K301 / Q9Y2R4
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 38855551
Gene end: 38869404
  
Corresponding Affymetrix probe sets: Dr.13799.1.S1_x_at (Zebrafish Array)   NM_001044315_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133983
NCBI entrez gene - 407696     See in Manteia.
RefSeq - NM_001044315
RefSeq Peptide - NP_001037780
swissprot - A0A0R4IJV5
ZFIN ID - ZDB-GENE-060623-1
Ensembl - ENSDARG00000100505
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DDX52ENSGALG00000005489Gallus gallus
 DDX52ENSG00000278053Homo sapiens
 Ddx52ENSMUSG00000020677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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