ENSGALG00000005489


Gallus gallus

Features
Gene ID: ENSGALG00000005489
  
Biological name :DDX52
  
Synonyms : DDX52 / probable ATP-dependent RNA helicase DDX52
  
Possible biological names infered from orthology : DExD-box helicase 52 / Q8K301 / Q9Y2R4
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 8652687
Gene end: 8659863
  
Corresponding Affymetrix probe sets: Gga.2924.2.S1_at (Chicken Array)   GgaAffx.3447.1.S1_at (Chicken Array)   GgaAffx.3447.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000038280
NCBI entrez gene - 417660     See in Manteia.
RefSeq - NM_001030725
RefSeq - XM_015295794
RefSeq Peptide - NP_001025896
swissprot - F1NQA6
Ensembl - ENSGALG00000005489
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx52ENSDARG00000100505Danio rerio
 DDX52ENSG00000278053Homo sapiens
 Ddx52ENSMUSG00000020677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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