ENSG00000278053


Homo sapiens

Features
Gene ID: ENSG00000278053
  
Biological name :DDX52
  
Synonyms : DDX52 / DExD-box helicase 52 / Q9Y2R4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q12
Gene start: 37609739
Gene end: 37643464
  
Corresponding Affymetrix probe sets: 1570415_at (Human Genome U133 Plus 2.0 Array)   210320_s_at (Human Genome U133 Plus 2.0 Array)   212834_at (Human Genome U133 Plus 2.0 Array)   213637_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477779
Ensembl peptide - ENSP00000484366
Ensembl peptide - ENSP00000483836
Ensembl peptide - ENSP00000483141
Ensembl peptide - ENSP00000479504
NCBI entrez gene - 11056     See in Manteia.
OMIM - 612500
RefSeq - XM_011524233
RefSeq - NM_001291476
RefSeq - NM_007010
RefSeq - XM_011524232
RefSeq Peptide - NP_008941
RefSeq Peptide - NP_001278405
swissprot - A0A087X121
swissprot - Q9Y2R4
swissprot - A0A087X069
swissprot - A0A087WTD6
swissprot - A0A087X1P7
Ensembl - ENSG00000278053
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx52ENSDARG00000100505Danio rerio
 DDX52ENSGALG00000005489Gallus gallus
 Ddx52ENSMUSG00000020677Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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