ENSDARG00000100536


Danio rerio

Features
Gene ID: ENSDARG00000100536
  
Biological name :nkrf
  
Synonyms : NFKB repressing factor / nkrf
  
Possible biological names infered from orthology : NF-kappa-B-repressing factor / O15226 / Q8BY02
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 32852388
Gene end: 32858973
  
Corresponding Affymetrix probe sets: Dr.4910.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000138935
NCBI entrez gene - 797627     See in Manteia.
RefSeq - NM_001004499
RefSeq Peptide - NP_001004499
swissprot - A0A0R4IUL8
ZFIN ID - ZDB-GENE-030616-73
Ensembl - ENSDARG00000100536
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NKRFENSGALG00000008645Gallus gallus
 NKRFENSG00000186416Homo sapiens
 NkrfENSMUSG00000044149Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdkn2aip / CDKN2A interacting protein / Q8BI72* / Q9NXV6* / Mus musculus CDKN2A interacting protein (Cdkn2aip), transcript variant 2, mRNA.*ENSDARG000000358538
cdkn2aipnl / CDKN2A interacting protein N-terminal like / Q96HQ2* / Q9D211* / CDKN2AIP N-terminal-like protein *ENSDARG000000533955


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR001374  R3H domain
 IPR014720  Double-stranded RNA-binding domain
 IPR021859  XRN2-binding (XTBD) domain
 IPR034071  NF-kappaB-repression factor, R3H domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr