ENSMUSG00000044149


Mus musculus

Features
Gene ID: ENSMUSG00000044149
  
Biological name :Nkrf
  
Synonyms : NF-kappa-B-repressing factor / Nkrf / Q8BY02
  
Possible biological names infered from orthology : NFKB repressing factor / O15226
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A3.3
Gene start: 36887540
Gene end: 36902899
  
Corresponding Affymetrix probe sets: 10604053 (MoGene1.0st)   1434398_at (Mouse Genome 430 2.0 Array)   1441325_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000061546
NCBI entrez gene - 77286     See in Manteia.
MGI - MGI:1924536
RefSeq - NM_029891
RefSeq - XM_006541409
RefSeq Peptide - NP_084167
swissprot - Q8BY02
Ensembl - ENSMUSG00000044149
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nkrfENSDARG00000100536Danio rerio
 NKRFENSGALG00000008645Gallus gallus
 NKRFENSG00000186416Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BI72 / Cdkn2aip / Mus musculus CDKN2A interacting protein (Cdkn2aip), transcript variant 2, mRNA. / Q9NXV6* / CDKN2A interacting protein*ENSMUSG000000380698
Q9D211 / Cdkn2aipnl / CDKN2AIP N-terminal-like protein / Q96HQ2* / CDKN2A interacting protein N-terminal like*ENSMUSG000000203921


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR001374  R3H domain
 IPR034071  NF-kappaB-repression factor, R3H domain
 IPR036867  R3H domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Catf/Catf
Genetic Background: Not Specified

Allelic Composition: Nkrftm1.1Hjh/Y
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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