ENSGALG00000008645


Gallus gallus

Features
Gene ID: ENSGALG00000008645
  
Biological name :NKRF
  
Synonyms : NFKB repressing factor / NKRF
  
Possible biological names infered from orthology : NF-kappa-B-repressing factor / O15226 / Q8BY02
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 16598334
Gene end: 16606619
  
Corresponding Affymetrix probe sets: Gga.12411.1.S1_at (Chicken Array)   Gga.14686.1.S1_s_at (Chicken Array)   GgaAffx.13090.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000059370
Ensembl peptide - ENSGALP00000014069
NCBI entrez gene - 422370     See in Manteia.
RefSeq - NM_001012887
RefSeq Peptide - NP_001012905
swissprot - F1NL52
swissprot - A0A1L1RKU1
Ensembl - ENSGALG00000008645
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nkrfENSDARG00000100536Danio rerio
 NKRFENSG00000186416Homo sapiens
 NkrfENSMUSG00000044149Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CDKN2AIP / CDKN2A interacting protein / Q8BI72* / Q9NXV6* / Mus musculus CDKN2A interacting protein (Cdkn2aip), transcript variant 2, mRNA.*ENSGALG0000001066110


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR001374  R3H domain
 IPR014720  Double-stranded RNA-binding domain
 IPR021859  XRN2-binding (XTBD) domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007165 signal transduction IBA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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