ENSDARG00000101205


Danio rerio

Features
Gene ID: ENSDARG00000101205
  
Biological name :mbd1a
  
Synonyms : mbd1a / methyl-CpG binding domain protein 1a / si:dkey-242k1.6
  
Possible biological names infered from orthology : MBD1 / methyl-CpG binding domain protein 1 / Mus musculus methyl-CpG binding domain protein 1 (Mbd1), transcript variant 4, mRNA. / Q9UIS9
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 7875110
Gene end: 7912936
  
Corresponding Affymetrix probe sets: Dr.14968.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000136203
Ensembl peptide - ENSDARP00000147826
Ensembl peptide - ENSDARP00000140471
NCBI entrez gene - 797143     See in Manteia.
RefSeq - NM_001309889
RefSeq Peptide - NP_001296818
swissprot - A0A0R4ITU2
swissprot - A0A0J9YJC6
ZFIN ID - ZDB-GENE-030131-4214
ZFIN ID - ZDB-GENE-041008-84
Ensembl - ENSDARG00000101205
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MBD1ENSG00000141644Homo sapiens
 Mbd1ENSMUSG00000024561Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mbd1b / methyl-CpG binding domain protein 1b / MBD1* / Q9UIS9* / methyl-CpG binding domain protein 1* / Mus musculus methyl-CpG binding domain protein 1 (Mbd1), transcript variant 4, mRNA.*ENSDARG0000002569916


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
SUMOylation of transcription cofactors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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