ENSDARG00000101521


Danio rerio

Features
Gene ID: ENSDARG00000101521
  
Biological name :UBE2M
  
Synonyms : si:ch1073-205c8.3 / UBE2M
  
Possible biological names infered from orthology : P61081 / P61082 / ubiquitin conjugating enzyme E2 M
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 48018464
Gene end: 48023442
  
Corresponding Affymetrix probe sets: Dr.13786.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000129958
Ensembl peptide - ENSDARP00000140920
Ensembl peptide - ENSDARP00000138225
Ensembl peptide - ENSDARP00000135845
Ensembl peptide - ENSDARP00000132582
Ensembl peptide - ENSDARP00000130790
NCBI entrez gene - 564377     See in Manteia.
swissprot - A0A0R4IUW9
swissprot - A0A0R4IUU4
swissprot - A0A0R4IJ18
swissprot - A0A0R4IGH4
swissprot - A0A0R4ICP0
swissprot - A0A0R4IB33
ZFIN ID - ZDB-GENE-030131-1059
Ensembl - ENSDARG00000101521
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 UBE2MENSG00000130725Homo sapiens
 Ube2mENSMUSG00000005575Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ube2f / Q6NY82 / ubiquitin-conjugating enzyme E2F (putative) / Q969M7* / Q9CY34* / UBE2F-SCLY* / UBE2F-SCLY readthrough (NMD candidate)*ENSDARG0000002575435


Protein motifs (from Interpro)
Interpro ID Name
 IPR000608  Ubiquitin-conjugating enzyme E2
 IPR016135  Ubiquitin-conjugating enzyme/RWD-like
 IPR023313  Ubiquitin-conjugating enzyme, active site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
TGF-beta receptor signaling activates SMADs
Dectin-1 mediated noncanonical NF-kB signaling
NIK-->noncanonical NF-kB signaling
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr