ENSDARG00000101641


Danio rerio

Features
Gene ID: ENSDARG00000101641
  
Biological name :trpm2
  
Synonyms : transient receptor potential cation channel, subfamily M, member 2 / trpm2
  
Possible biological names infered from orthology : O94759 / Q91YD4
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 52838336
Gene end: 52920305
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132953
Ensembl peptide - ENSDARP00000136274
NCBI entrez gene - 799412     See in Manteia.
RefSeq - NM_001288817
RefSeq - XM_009304992
RefSeq - XM_021478778
RefSeq Peptide - NP_001275746
swissprot - A0A0R4IMY7
swissprot - A0A0R4IF00
ZFIN ID - ZDB-GENE-061214-4
Ensembl - ENSDARG00000101641
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRPM2ENSGALG00000005631Gallus gallus
 TRPM2ENSG00000142185Homo sapiens
 Trpm2ENSMUSG00000009292Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpm4a / transient receptor potential cation channel, subfamily M, member 4a / TRPM4* / Q7TN37* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000005999329
trpm5 / transient receptor potential cation channel, subfamily M, member 5 / Q9JJH7* / Q9NZQ8*ENSDARG0000005979228
trpm4b.2 / transient receptor potential cation channel, subfamily M, member 4b, transient receptor potential cation channel, subfamily M, member 4b, tandem duplicate 2 / TRPM4* / Q8TD43* / ...ENSDARG0000006343527
si:ch211-173d10.1 / TRPM4* / Q7TN37* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000006334727
trpm1a / transient receptor potential cation channel, subfamily M, member 1a / TRPM1* / Q2TV84* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000001125925
trpm3 / transient receptor potential cation channel, subfamily M, member 3 / Q9HCF6*ENSDARG0000003918125
trpm1b / transient receptor potential cation channel, subfamily M, member 1b / TRPM1* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000010347624
trpm6 / transient receptor potential cation channel, subfamily M, member 6 / Q9BX84*ENSDARG0000010345423
trpm7 / transient receptor potential cation channel, subfamily M, member 7 / Q923J1* / Q96QT4*ENSDARG0000003623222
si:ch211-173d10.1 / TRPM4* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000010944212


Protein motifs (from Interpro)
Interpro ID Name
 IPR005821  Ion transport domain
 IPR015797  NUDIX hydrolase-like domain superfamily
 IPR029594  Transient receptor potential cation channel subfamily M member 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005261 cation channel activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0047631 ADP-ribose diphosphatase activity IEA


Pathways (from Reactome)
Pathway description
TRP channels
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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