ENSDARG00000102245


Danio rerio

Features
Gene ID: ENSDARG00000102245
  
Biological name :tk1
  
Synonyms : thymidine kinase 1, soluble / tk1
  
Possible biological names infered from orthology : P04183 / P04184 / thymidine kinase 1
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 45153104
Gene end: 45158056
  
Corresponding Affymetrix probe sets: Dr.20777.1.S1_at (Zebrafish Array)   Dr.20777.1.S2_at (Zebrafish Array)   NM_199832_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000143489
Ensembl peptide - ENSDARP00000137376
NCBI entrez gene - 327590     See in Manteia.
RefSeq - NM_199832
RefSeq Peptide - NP_956126
swissprot - A0A0R4IP36
swissprot - Q803Y1
ZFIN ID - ZDB-GENE-030131-5801
Ensembl - ENSDARG00000102245
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TK1ENSGALG00000007191Gallus gallus
 TK1ENSG00000167900Homo sapiens
 Tk1ENSMUSG00000025574Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001267  Thymidine kinase
 IPR020633  Thymidine kinase, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009157 deoxyribonucleoside monophosphate biosynthetic process IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0071897 DNA biosynthetic process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004797 thymidine kinase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Pyrimidine salvage


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000102245 tk1 / thymidine kinase 1, soluble / P04183* / P04184* / thymidine kinase 1*  / complex






 

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contact: otassy@igbmc.fr