ENSDARG00000102394


Danio rerio

Features
Gene ID: ENSDARG00000102394
  
Biological name :ap1g1
  
Synonyms : adaptor-related protein complex 1, gamma 1 subunit / ap1g1
  
Possible biological names infered from orthology : AP-1 complex subunit gamma-1 / O43747 / P22892
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 69308270
Gene end: 69352424
  
Corresponding Affymetrix probe sets: Dr.11567.1.S1_at (Zebrafish Array)   NM_199682_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000139530
NCBI entrez gene - 324466     See in Manteia.
RefSeq - NM_199682
RefSeq Peptide - NP_955976
swissprot - A0A0R4IU05
ZFIN ID - ZDB-GENE-030131-3187
Ensembl - ENSDARG00000102394
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AP1G1ENSGALG00000000848Gallus gallus
 AP1G1ENSG00000166747Homo sapiens
 Ap1g1ENSMUSG00000031731Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ap1g2 / adaptor-related protein complex 1, gamma 2 subunit / O75843*ENSDARG0000005433760
ap4e1 / adaptor-related protein complex 4, epsilon 1 subunit / Q80V94* / Q9UPM8* / AP-4 complex subunit epsilon-1 *ENSDARG0000010368422


Protein motifs (from Interpro)
Interpro ID Name
 IPR002553  Clathrin/coatomer adaptor, adaptin-like, N-terminal
 IPR008152  Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
 IPR008153  Gamma-adaptin ear (GAE) domain
 IPR011989  Armadillo-like helical
 IPR013041  Clathrin adaptor, appendage, Ig-like subdomain superfamily
 IPR016024  Armadillo-type fold
 IPR017107  Adaptor protein complex AP-1, gamma subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0003401 axis elongation IMP
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0007417 central nervous system development IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0033339 pectoral fin development IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030117 membrane coat IEA
 cellular_componentGO:0030121 AP-1 adaptor complex IEA
 cellular_componentGO:0030131 clathrin adaptor complex IEA


Pathways (from Reactome)
Pathway description
MHC class II antigen presentation
Lysosome Vesicle Biogenesis
Golgi Associated Vesicle Biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000005 artery artery malformed , abnormal
Show

 ZFA:0000029 hindbrain hindbrain morphology , abnormal
hindbrain decreased amount , abnormal
Show

 ZFA:0000042 midbrain hindbrain boundary midbrain hindbrain boundary decreased amount , abnormal
Show

 ZFA:0000075 spinal cord spinal cord neuron decreased amount , abnormal
Show

 ZFA:0000079 telencephalon telencephalon decreased amount , abnormal
Show

 ZFA:0000082 vein vein malformed , abnormal
Show

 ZFA:0000101 diencephalon diencephalon decreased amount , abnormal
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 ZFA:0000109 forebrain forebrain morphology , abnormal
forebrain decreased amount , abnormal
Show

 ZFA:0000110 fourth ventricle fourth ventricle absent , abnormal
fourth ventricle decreased amount , abnormal
Show

 ZFA:0000114 heart heart edematous , abnormal
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 ZFA:0000128 midbrain midbrain morphology , abnormal
midbrain decreased amount , abnormal
Show

 ZFA:0000155 somite somite shape , abnormal
Show

 ZFA:0000160 tegmentum tegmentum decreased amount , abnormal
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 ZFA:0001058 caudal fin caudal fin curved , abnormal
caudal fin kinked , abnormal
Show

 ZFA:0001069 ventral fin fold ventral fin fold absent , abnormal
ventral fin fold decreased size , abnormal
Show

 ZFA:0001094 whole organism whole organism lacks parts or has fewer parts of type pectoral fin , abnormal
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 ZFA:0001114 head head morphology , abnormal
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 ZFA:0001115 trunk trunk decreased thickness , abnormal
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 ZFA:0001285 intersegmental vessel intersegmental vessel malformed , abnormal
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 ZFA:0005025 dorsal longitudinal anastomotic vessel dorsal longitudinal anastomotic vessel malformed , abnormal
Show

 ZFA:0009044 blood cell blood cell mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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