ENSDARG00000102564


Danio rerio

Features
Gene ID: ENSDARG00000102564
  
Biological name :gfra1b
  
Synonyms : gdnf family receptor alpha 1b / gfra1b
  
Possible biological names infered from orthology : GDNF family receptor alpha 1 / GFRA1 / P56159 / P97785
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 29763546
Gene end: 29818209
  
Corresponding Affymetrix probe sets: Dr.21001.1.S1_at (Zebrafish Array)   NM_131731_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000137090
NCBI entrez gene - 79377     See in Manteia.
RefSeq - NM_131731
RefSeq Peptide - NP_571806
swissprot - F1QDI3
ZFIN ID - ZDB-GENE-010226-3
Ensembl - ENSDARG00000102564
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GFRA1ENSGALG00000009173Gallus gallus
 GFRA1ENSG00000151892Homo sapiens
 Gfra1ENSMUSG00000025089Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
gfra2a / GDNF family receptor alpha 2a / GFRA2* / O00451* / O08842* / GDNF family receptor alpha 2*ENSDARG0000004272339
gfra4b / GDNF family receptor alpha 4b / GFRA4* / Q9GZZ7* / Q9JJT2* / GDNF family receptor alpha 4*ENSDARG0000007458236
gfra4a / GDNF family receptor alpha 4a / GFRA4* / Q9GZZ7* / Q9JJT2* / GDNF family receptor alpha 4*ENSDARG0000005665135
gfra3 / GDNF family receptor alpha 3 / O35118* / O60609*ENSDARG0000008770431
gfra2b / GDNF family receptor alpha 2b / GFRA2* / O00451* / O08842* / GDNF family receptor alpha 2*ENSDARG0000004401529
gfra1a / gdnf family receptor alpha 1a / GFRA1* / P56159* / P97785* / GDNF family receptor alpha 1*ENSDARG0000009973215


Protein motifs (from Interpro)
Interpro ID Name
 IPR003438  Glial cell line-derived neurotrophic factor receptor
 IPR016017  GDNF/GAS1
 IPR017372  Glial cell line-derived neurotrophic factor receptor, alpha 1/2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048484 enteric nervous system development IGI
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA


Pathways (from Reactome)
Pathway description
RAF/MAP kinase cascade
RET signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005775 enteric neuron enteric neuron decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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