ENSDARG00000103380


Danio rerio

Features
Gene ID: ENSDARG00000103380
  
Biological name :si:ch73-21k16.1
  
Synonyms : si:ch73-21k16.1
  
Possible biological names infered from orthology : lipin 1 / LPIN1 / Mus musculus lipin 1 (Lpin1), transcript variant 4, mRNA. / Q14693
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 46867816
Gene end: 46921035
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133683
Ensembl peptide - ENSDARP00000138463
swissprot - A0A0R4IJI4
swissprot - A0A0R4IU25
ZFIN ID - ZDB-GENE-081031-51
Ensembl - ENSDARG00000103380
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LPIN1ENSGALG00000016456Gallus gallus
 LPIN1ENSG00000134324Homo sapiens
 Lpin1ENSMUSG00000020593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lpin1 / lipin 1 / Q14693* / Mus musculus lipin 1 (Lpin1), transcript variant 4, mRNA.*ENSDARG0000002023962
lpin2 / lipin 2 / Q92539* / Q99PI5* / Mus musculus lipin 2 (Lpin2), transcript variant 3, mRNA.*ENSDARG0000006121451
zgc:123305 / LPIN3* / Q99PI4* / Q9BQK8* / lipin 3* / Phosphatidate phosphatase LPIN3 *ENSDARG0000001556345


Protein motifs (from Interpro)
Interpro ID Name
 IPR007651  Lipin, N-terminal
 IPR013209  Lipin/Ned1/Smp2 (LNS2)
 IPR023214  HAD superfamily
 IPR028794  Phosphatidate phosphatase LPIN1
 IPR031315  LNS2/PITP
 IPR031703  Lipin, middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009062 fatty acid catabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0019432 triglyceride biosynthetic process IEA
 molecular_functionGO:0008195 phosphatidate phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PC
Synthesis of PE
Depolymerisation of the Nuclear Lamina
Triglyceride biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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