ENSGALG00000016456


Gallus gallus

Features
Gene ID: ENSGALG00000016456
  
Biological name :LPIN1
  
Synonyms : lipin 1 / LPIN1
  
Possible biological names infered from orthology : Mus musculus lipin 1 (Lpin1), transcript variant 4, mRNA. / Q14693
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 97873227
Gene end: 97919894
  
Corresponding Affymetrix probe sets: GgaAffx.10534.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047695
Ensembl peptide - ENSGALP00000048446
Ensembl peptide - ENSGALP00000026501
NCBI entrez gene - 421945     See in Manteia.
RefSeq - XM_419957
RefSeq - XM_015276091
RefSeq - XM_015276092
RefSeq - XM_015276093
RefSeq - XM_004935771
RefSeq - XM_004935772
RefSeq - XM_004935773
RefSeq - XM_004935774
RefSeq - XM_015276089
RefSeq - XM_015276090
swissprot - E1BWY2
swissprot - H6SV45
swissprot - A0A1D5P4T3
Ensembl - ENSGALG00000016456
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lpin1ENSDARG00000020239Danio rerio
 si:ch73-21k16.1ENSDARG00000103380Danio rerio
 LPIN1ENSG00000134324Homo sapiens
 Lpin1ENSMUSG00000020593Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LPIN2 / lipin 2 / Q92539* / Q99PI5* / Mus musculus lipin 2 (Lpin2), transcript variant 3, mRNA.*ENSGALG0000001483650


Protein motifs (from Interpro)
Interpro ID Name
 IPR007651  Lipin, N-terminal
 IPR013209  Lipin/Ned1/Smp2 (LNS2)
 IPR023214  HAD superfamily
 IPR028794  Phosphatidate phosphatase LPIN1
 IPR031315  LNS2/PITP
 IPR031703  Lipin, middle domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009062 fatty acid catabolic process IEA
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0019432 triglyceride biosynthetic process IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IBA
 cellular_componentGO:0005634 nucleus IBA
 cellular_componentGO:0005741 mitochondrial outer membrane IBA
 molecular_functionGO:0003713 transcription coactivator activity IBA
 molecular_functionGO:0008195 phosphatidate phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PC
Synthesis of PE
Depolymerisation of the Nuclear Lamina
Triglyceride biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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