ENSDARG00000103464
Danio rerio | |
Features
| Gene ID: | ENSDARG00000103464 | | | | | Biological name : | pggt1b | | | | | Synonyms : | pggt1b / protein geranylgeranyltransferase type I, beta subunit | | | | | Possible biological names infered from orthology : | Geranylgeranyl transferase type-1 subunit beta / P53609 / protein geranylgeranyltransferase type I subunit beta / Q8BUY9 | | | | | Species: | Danio rerio | | | | | Chr. number: | 8 | | Strand: | -1 | | Band: | | | Gene start: | 411977 | | Gene end: | 419003 | | | | | Corresponding Affymetrix probe sets: | Dr.10651.1.A1_at (Zebrafish Array) NM_001030255_at (Zebrafish Genome Array with custom cdf files) | | | | | Cross references: | Ensembl peptide - ENSDARP00000136678
NCBI entrez gene - 570808
See in Manteia.
RefSeq - NM_001030255
RefSeq Peptide - NP_001025426
swissprot - A0A0R4IR82
ZFIN ID - ZDB-GENE-050913-85
Ensembl - ENSDARG00000103464
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See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed
Ortholog prediction (from Ensembl)
Paralog prediction (from Ensembl)
| rabggtb / Rab geranylgeranyltransferase, beta subunit / P53611* / P53612* / Rab geranylgeranyl transferase, b subunit* | ENSDARG00000068587 | 29 |
Protein motifs (from Interpro)
| IPR001330 | PFTB repeat | | IPR008930 | Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid |
Gene Ontology (GO)
Pathways (from Reactome)
No match
Phenotype (from MGI, Zfin or HPO)
| ZFA:0000128 | midbrain | midbrain hemorrhagic , abnormal |
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| | ZFA:0000206 | facial nerve motor nucleus | facial nerve motor nucleus mislocalised anteriorly , abnormal |
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| | ZFA:0005145 | muscle | muscle damaged , abnormal
muscle myofibril decreased diameter , abnormal |
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Interacting proteins (from Reactome)
No match
0 s.
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