ENSDARG00000103735


Danio rerio

Features
Gene ID: ENSDARG00000103735
  
Biological name :elovl1b
  
Synonyms : elovl1b / ELOVL fatty acid elongase 1b
  
Possible biological names infered from orthology : Elongation of very long chain fatty acids protein 1 / ELOVL1 / ELOVL fatty acid elongase 1 / Q9BW60 / Q9JLJ5
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 13094179
Gene end: 13152524
  
Corresponding Affymetrix probe sets: Dr.15059.1.S1_at (Zebrafish Array)   Dr.15059.2.S1_at (Zebrafish Array)   NM_213416_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000139034
Ensembl peptide - ENSDARP00000154242
Ensembl peptide - ENSDARP00000151610
Ensembl peptide - ENSDARP00000147084
Ensembl peptide - ENSDARP00000144796
Ensembl peptide - ENSDARP00000141128
Ensembl peptide - ENSDARP00000133941
Ensembl peptide - ENSDARP00000134699
Ensembl peptide - ENSDARP00000138412
NCBI entrez gene - 406725     See in Manteia.
RefSeq - NM_213416
RefSeq - XM_009305890
RefSeq Peptide - NP_001315523
RefSeq Peptide - NP_998581
swissprot - A0A0R4IF82
swissprot - A0A0R4IXV7
swissprot - A0A0R4IT00
swissprot - A0A0R4IRP1
swissprot - A0A0R4IH13
ZFIN ID - ZDB-GENE-040426-2755
Ensembl - ENSDARG00000103735
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ELOVL1ENSGALG00000009988Gallus gallus
 ELOVL1ENSG00000066322Homo sapiens
 Elovl1ENSMUSG00000006390Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
elovl1a / ELOVL fatty acid elongase 1a / Q9JLJ5* / ELOVL1* / Q9BW60* / ELOVL fatty acid elongase 1* / Elongation of very long chain fatty acids protein 1 *ENSDARG0000009996065
elovl7a / ELOVL fatty acid elongase 7a / A1L3X0* / ELOVL7* / Q9D2Y9* / ELOVL fatty acid elongase 7* / Elongation of very long chain fatty acids protein 7 *ENSDARG0000006927948
elovl8b / ELOVL fatty acid elongase 8bENSDARG0000005736538
elovl4a / ELOVL fatty acid elongase 4a / Q9GZR5* / ELOVL4* / Q9EQC4* / ELOVL fatty acid elongase 4* / Elongation of very long chain fatty acids protein 4 *ENSDARG0000000677338
elovl4b / ELOVL fatty acid elongase 4b / Q9GZR5* / ELOVL4* / Q9EQC4* / ELOVL fatty acid elongase 4* / Elongation of very long chain fatty acids protein 4 *ENSDARG0000002749538
elovl8a / ELOVL fatty acid elongase 8aENSDARG0000006855137
elovl5 / ELOVL fatty acid elongase 5 / Q8BHI7* / Q9NYP7* / Elongation of very long chain fatty acids protein 5 *ENSDARG0000000497935
elovl2 / ELOVL fatty acid elongase 2 / Q9JLJ4* / Q9NXB9* / Elongation of very long chain fatty acids protein 2 *ENSDARG0000004541432
elovl6 / Q6PC64 / ELOVL fatty acid elongase 6 / Q920L5* / Q9H5J4* / Elongation of very long chain fatty acids protein 6 *ENSDARG0000000440223
elovl6l / ELOVL family member 6, elongation of long chain fatty acids likeENSDARG0000003863921
zgc:92749ENSDARG0000001263219


Protein motifs (from Interpro)
Interpro ID Name
 IPR002076  ELO family
 IPR033681  Elongation of very long chain fatty acids protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006636 unsaturated fatty acid biosynthetic process IEA
 biological_processGO:0019367 fatty acid elongation, saturated fatty acid IEA
 biological_processGO:0034625 fatty acid elongation, monounsaturated fatty acid IEA
 biological_processGO:0035338 long-chain fatty-acyl-CoA biosynthetic process IEA
 biological_processGO:0042761 very long-chain fatty acid biosynthetic process IEA
 biological_processGO:0048794 swim bladder development IGI
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0009922 fatty acid elongase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0102336 3-oxo-arachidoyl-CoA synthase activity IEA
 molecular_functionGO:0102337 3-oxo-cerotoyl-CoA synthase activity IEA
 molecular_functionGO:0102338 3-oxo-lignoceronyl-CoA synthase activity IEA
 molecular_functionGO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000076 swim bladder swim bladder uninflated , abnormal
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 ZFA:0000150 pronephric duct pronephric duct decreased distribution , abnormal
Show

 ZFA:0000151 pronephros pronephros decreased functionality , abnormal
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 ZFA:0001094 whole organism whole organism anterior-posterior axis increased curvature , abnormal
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 ZFA:0001558 pronephric tubule pronephric tubule decreased distribution , abnormal
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 ZFA:0001621 pronephric proximal straight tubule pronephric proximal straight tubule decreased distribution , abnormal
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 ZFA:0001622 pronephric distal early tubule pronephric distal early tubule decreased distribution , abnormal
Show

 ZFA:0001624 pronephric distal late tubule pronephric distal late tubule decreased distribution , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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