ENSDARG00000104242


Danio rerio

Features
Gene ID: ENSDARG00000104242
  
Biological name :dcp2
  
Synonyms : dcp2 / decapping mRNA 2
  
Possible biological names infered from orthology : m7GpppN-mRNA hydrolase / Q8IU60 / Q9CYC6
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 6473092
Gene end: 6494070
  
Corresponding Affymetrix probe sets: Dr.15210.1.S1_at (Zebrafish Array)   NM_200152_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000132902
NCBI entrez gene - 393121     See in Manteia.
RefSeq - NM_200152
RefSeq Peptide - NP_956446
swissprot - Q803B9
ZFIN ID - ZDB-GENE-040426-851
Ensembl - ENSDARG00000104242
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DCP2ENSGALG00000000215Gallus gallus
 DCP2ENSG00000172795Homo sapiens
 Dcp2ENSMUSG00000024472Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000086  NUDIX hydrolase domain
 IPR007722  mRNA decapping protein 2, Box A domain
 IPR015797  NUDIX hydrolase-like domain superfamily
 IPR020084  NUDIX hydrolase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IBA
 biological_processGO:0006402 mRNA catabolic process IMP
 cellular_componentGO:0000932 P-body IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0030145 manganese ion binding IEA
 molecular_functionGO:0050072 m7G(5")pppN diphosphatase activity IBA


Pathways (from Reactome)
Pathway description
mRNA decay by 5 to 3 exoribonuclease
Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA
KSRP (KHSRP) binds and destabilizes mRNA


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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