ENSDARG00000104752


Danio rerio

Features
Gene ID: ENSDARG00000104752
  
Biological name :COLEC10
  
Synonyms : COLEC10 / si:ch211-93i7.4
  
Possible biological names infered from orthology : Collectin-10 / collectin subfamily member 10 / Q8CF98 / Q9Y6Z7
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 9680908
Gene end: 9694822
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138006
NCBI entrez gene - 794040     See in Manteia.
RefSeq - NM_001289988
RefSeq Peptide - NP_001276917
swissprot - A0A0R4IRN4
ZFIN ID - ZDB-GENE-141216-492
Ensembl - ENSDARG00000104752
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q2LK95ENSGALG00000033144Gallus gallus
 Q9Y6Z7ENSG00000184374Homo sapiens
 Q8CF98ENSMUSG00000038591Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
colec11 / collectin sub-family member 11 / Q9BWP8* / collectin subfamily member 11*ENSDARG0000001326635
hbl2 / hexose-binding lectin 2 / Mbl1* / MBL2* / SFTPD* / P41317* / P11226* / P35247* / P39039* / P50404* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protei...ENSDARG0000009468122
hbl1 / zmp:0000000729 / hexose-binding lectin 1 / MBL2* / Mbl1* / SFTPD* / P41317* / P11226* / P35247* / P39039* / Q8IWL2* / SFTPA1* / SFTPA2* / P50404* / Q8IWL1* / surfactant protein D* / ...ENSDARG0000006822121
mbl2 / mannose binding lectin 2 / Mbl1* / SFTPD* / P50404* / P11226* / P35247* / P39039* / P41317* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protein A2* /...ENSDARG0000006822021
hbl4 / hexose-binding lectin 4 / Mbl1* / MBL2* / SFTPD* / P41317* / P11226* / P35247* / P39039* / P50404* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protei...ENSDARG0000005420219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR008160  Collagen triple helix repeat
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005581 collagen trimer IEA


Pathways (from Reactome)
Pathway description
Lectin pathway of complement activation
Initial triggering of complement


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000068726 masp1 / mannan-binding lectin serine peptidase 1 / P48740* / P98064* / Mus musculus mannan-binding lectin serine peptidase 1 (Masp1), transcript variant 1, mRNA.*  / complex
 ENSDARG00000015065 c4 / complement component 4 / C4A* / C4B* / P0C0L5* / P01029* / P0C0L4* / complement C4B (Chido blood group)* / complement C4A (Rodgers blood group)* / Complement C4-B Complement C4 beta ch...  / reaction






 

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