ENSDARG00000013266


Danio rerio

Features
Gene ID: ENSDARG00000013266
  
Biological name :colec11
  
Synonyms : colec11 / collectin sub-family member 11
  
Possible biological names infered from orthology : collectin subfamily member 11 / Q9BWP8
  
Species: Danio rerio
  
Chr. number: 17
Strand: -1
Band:
Gene start: 36516695
Gene end: 36529449
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000016314
Ensembl peptide - ENSDARP00000146252
NCBI entrez gene - 492459     See in Manteia.
RefSeq - NM_001007331
RefSeq Peptide - NP_001007332
swissprot - F1RCL0
ZFIN ID - ZDB-GENE-041114-11
Ensembl - ENSDARG00000013266
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COLEC11ENSGALG00000037309Gallus gallus
 Q9BWP8ENSG00000118004Homo sapiens
 Colec11ENSMUSG00000036655Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COLEC10 / si:ch211-93i7.4 / Q8CF98* / Q9Y6Z7* / Collectin-10 * / collectin subfamily member 10*ENSDARG0000010475235
hbl2 / hexose-binding lectin 2 / Mbl1* / MBL2* / SFTPD* / P41317* / P11226* / P35247* / P39039* / P50404* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protei...ENSDARG0000009468126
mbl2 / mannose binding lectin 2 / Mbl1* / SFTPD* / P50404* / P11226* / P35247* / P39039* / P41317* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protein A2* /...ENSDARG0000006822026
hbl1 / zmp:0000000729 / hexose-binding lectin 1 / MBL2* / Mbl1* / SFTPD* / P41317* / P11226* / P35247* / P39039* / Q8IWL2* / SFTPA1* / SFTPA2* / P50404* / Q8IWL1* / surfactant protein D* / ...ENSDARG0000006822125
hbl4 / hexose-binding lectin 4 / Mbl1* / MBL2* / SFTPD* / P41317* / P11226* / P35247* / P39039* / P50404* / Q8IWL1* / Q8IWL2* / SFTPA1* / SFTPA2* / surfactant protein D* / surfactant protei...ENSDARG0000005420224


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR008160  Collagen triple helix repeat
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018378  C-type lectin, conserved site
 IPR033990  Collectin, C-type lectin-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005581 collagen trimer IEA


Pathways (from Reactome)
Pathway description
Lectin pathway of complement activation
Initial triggering of complement
Scavenging by Class A Receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001205 Meckel s cartilage Meckels cartilage decreased length , abnormal
Show

 ZFA:0001321 neurocranial trabecula neurocranial trabecula decreased length , abnormal
Show

 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage decreased length , abnormal
Show

 ZFA:0001400 ceratohyal cartilage ceratohyal cartilage malformed , abnormal
Show

 ZFA:0001405 ethmoid cartilage ethmoid cartilage decreased length , abnormal
Show

 ZFA:0009090 pigment cell pigment cell spatial pattern , abnormal
Show

 ZFA:0009165 neural crest cell neural crest cell mislocalised , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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