ENSDARG00000104906


Danio rerio

Features
Gene ID: ENSDARG00000104906
  
Biological name :mtr
  
Synonyms : 5-methyltetrahydrofolate-homocysteine methyltransferase / mtr
  
Possible biological names infered from orthology : A6H5Y3 / Methionine synthase / Q99707
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 47081783
Gene end: 47115440
  
Corresponding Affymetrix probe sets: Dr.10106.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000139035
swissprot - A0A0G2L2R7
ZFIN ID - ZDB-GENE-031001-5
Ensembl - ENSDARG00000104906
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTRENSGALG00000014464Gallus gallus
 MTRENSG00000116984Homo sapiens
 MtrENSMUSG00000021311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000489  Pterin-binding domain
 IPR003726  Homocysteine-binding domain
 IPR003759  Cobalamin (vitamin B12)-binding module, cap domain
 IPR004223  Vitamin B12-dependent methionine synthase, activation domain
 IPR006158  Cobalamin (vitamin B12)-binding domain
 IPR011005  Dihydropteroate synthase-like
 IPR011822  Cobalamin-dependent methionine synthase
 IPR033706  Methionine synthase, B12-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0009086 methionine biosynthetic process IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042558 pteridine-containing compound metabolic process IEA
 biological_processGO:0044237 cellular metabolic process IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008705 methionine synthase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031419 cobalamin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Methylation
Sulfur amino acid metabolism
Cobalamin (Cbl, vitamin B12) transport and metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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