ENSGALG00000014464


Gallus gallus

Features
Gene ID: ENSGALG00000014464
  
Biological name :MTR
  
Synonyms : methionine synthase / MTR
  
Possible biological names infered from orthology : 5-methyltetrahydrofolate-homocysteine methyltransferase / A6H5Y3 / Q99707
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 37699081
Gene end: 37746563
  
Corresponding Affymetrix probe sets: GgaAffx.12960.1.S1_at (Chicken Array)   GgaAffx.1815.1.S1_s_at (Chicken Array)   GgaAffx.6847.1.S1_at (Chicken Array)   GgaAffx.6847.2.S1_s_at (Chicken Array)   GgaAffx.9187.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000053092
Ensembl peptide - ENSGALP00000017592
NCBI entrez gene - 422069     See in Manteia.
RefSeq - XM_015284113
RefSeq - NM_001031104
RefSeq - XM_015284110
RefSeq - XM_015284111
RefSeq Peptide - NP_001026275
swissprot - F1NLY0
swissprot - A0A1D5PJU6
Ensembl - ENSGALG00000014464
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mtrENSDARG00000104906Danio rerio
 MTRENSG00000116984Homo sapiens
 MtrENSMUSG00000021311Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000489  Pterin-binding domain
 IPR003726  Homocysteine-binding domain
 IPR003759  Cobalamin (vitamin B12)-binding module, cap domain
 IPR004223  Vitamin B12-dependent methionine synthase, activation domain
 IPR006158  Cobalamin (vitamin B12)-binding domain
 IPR011005  Dihydropteroate synthase-like
 IPR011822  Cobalamin-dependent methionine synthase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0009086 methionine biosynthetic process IEA
 biological_processGO:0009235 cobalamin metabolic process IEA
 biological_processGO:0032259 methylation IEA
 biological_processGO:0042558 pteridine-containing compound metabolic process IEA
 biological_processGO:0044237 cellular metabolic process IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0008705 methionine synthase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031419 cobalamin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Methylation
Sulfur amino acid metabolism
Cobalamin (Cbl, vitamin B12) transport and metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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