ENSDARG00000107511


Danio rerio

Features
Gene ID: ENSDARG00000107511
  
Biological name :tgs1
  
Synonyms : lyn / tgs1 / trimethylguanosine synthase 1
  
Possible biological names infered from orthology : Q923W1 / Q96RS0 / Trimethylguanosine synthase
  
Species: Danio rerio
  
Chr. number: 2
Strand: -1
Band:
Gene start: 27611956
Gene end: 27651674
  
Corresponding Affymetrix probe sets: Dr.24085.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144467
Ensembl peptide - ENSDARP00000116188
NCBI entrez gene - 100537552     See in Manteia.
swissprot - F1QWD6
swissprot - A0A286YB74
swissprot - F1R4S6
ZFIN ID - ZDB-GENE-040912-7
ZFIN ID - ZDB-GENE-070802-2
Ensembl - ENSDARG00000107511
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TGS1ENSGALG00000015340Gallus gallus
 TGS1ENSG00000137574Homo sapiens
 Tgs1ENSMUSG00000028233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019012  RNA cap guanine-N2 methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0009452 7-methylguanosine RNA capping IEA
 biological_processGO:0009611 response to wounding IMP
 biological_processGO:0030593 neutrophil chemotaxis IMP
 biological_processGO:0036261 7-methylguanosine cap hypermethylation IBA
 biological_processGO:0090022 regulation of neutrophil chemotaxis IMP
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0071164 RNA trimethylguanosine synthase activity IBA


Pathways (from Reactome)
Pathway description
snRNP Assembly
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000037 anatomical structure anatomical structure amount , ameliorated
Show

 ZFA:0000094 blood island blood island neutrophil increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr