ENSGALG00000015340


Gallus gallus

Features
Gene ID: ENSGALG00000015340
  
Biological name :TGS1
  
Synonyms : TGS1 / trimethylguanosine synthase
  
Possible biological names infered from orthology : Q923W1 / Q96RS0 / trimethylguanosine synthase 1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 111439673
Gene end: 111462441
  
Corresponding Affymetrix probe sets: Gga.18138.1.S1_at (Chicken Array)   Gga.3057.1.S1_at (Chicken Array)   GgaAffx.12660.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000024711
NCBI entrez gene - 421126     See in Manteia.
RefSeq - NM_001006389
RefSeq Peptide - NP_001006389
swissprot - F1NL90
Ensembl - ENSGALG00000015340
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lynENSDARG00000107511Danio rerio
 TGS1ENSG00000137574Homo sapiens
 Tgs1ENSMUSG00000028233Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019012  RNA cap guanine-N2 methyltransferase
 IPR029063  S-adenosyl-L-methionine-dependent methyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001510 RNA methylation IEA
 biological_processGO:0009452 7-methylguanosine RNA capping IEA
 biological_processGO:0036261 7-methylguanosine cap hypermethylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008168 methyltransferase activity IEA
 molecular_functionGO:0071164 RNA trimethylguanosine synthase activity IEA


Pathways (from Reactome)
Pathway description
snRNP Assembly
Regulation of lipid metabolism by Peroxisome proliferator-activated receptor alpha (PPARalpha)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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