ENSDARG00000116246


Danio rerio

Features
Gene ID: ENSDARG00000116246
  
Biological name :ccs
  
Synonyms : ccs / copper chaperone for superoxide dismutase
  
Possible biological names infered from orthology : O14618 / Q9WU84
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 6915609
Gene end: 6932033
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000133770
NCBI entrez gene - 110439923     See in Manteia.
swissprot - A0A0R4IHZ8
ZFIN ID - ZDB-GENE-050417-322
Ensembl - ENSDARG00000116246
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CCSENSG00000173992Homo sapiens
 CcsENSMUSG00000034108Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ccs / copper chaperone for superoxide dismutase / O14618* / Q9WU84*ENSDARG0000009200399
sod1 / O73872 / superoxide dismutase 1, soluble / P00441* / P08228* / superoxide dismutase 1* / Superoxide dismutase [Cu-Zn] *ENSDARG0000004384827
sod3b / superoxide dismutase 3, extracellular b / SOD3* / P08294* / O09164* / superoxide dismutase 3* / superoxide dismutase 3, extracellular*ENSDARG0000007918318
sod3a / superoxide dismutase 3, extracellular a / SOD3* / P08294* / O09164* / superoxide dismutase 3* / superoxide dismutase 3, extracellular*ENSDARG0000007016818


Protein motifs (from Interpro)
Interpro ID Name
 IPR001424  Superoxide dismutase, copper/zinc binding domain
 IPR006121  Heavy metal-associated domain, HMA
 IPR018152  Superoxide dismutase, copper/zinc, binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030001 metal ion transport IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Detoxification of Reactive Oxygen Species


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr