ENSG00000003756


Homo sapiens

Features
Gene ID: ENSG00000003756
  
Biological name :RBM5
  
Synonyms : P52756 / RBM5 / RNA binding motif protein 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: p21.31
Gene start: 50088908
Gene end: 50119021
  
Corresponding Affymetrix probe sets: 201394_s_at (Human Genome U133 Plus 2.0 Array)   201395_at (Human Genome U133 Plus 2.0 Array)   209936_at (Human Genome U133 Plus 2.0 Array)   230742_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000378603
Ensembl peptide - ENSP00000419534
Ensembl peptide - ENSP00000414218
Ensembl peptide - ENSP00000406119
Ensembl peptide - ENSP00000394622
Ensembl peptide - ENSP00000390711
Ensembl peptide - ENSP00000384872
Ensembl peptide - ENSP00000343054
NCBI entrez gene - 10181     See in Manteia.
OMIM - 606884
RefSeq - XM_017005507
RefSeq - XM_017005506
RefSeq - XM_017005505
RefSeq - XM_017005504
RefSeq - XM_017005503
RefSeq - XM_011533262
RefSeq - XM_011533261
RefSeq - XM_006712917
RefSeq - NM_005778
RefSeq Peptide - NP_005769
swissprot - P52756
swissprot - E1CJT4
swissprot - H7BYM9
swissprot - F8WE23
swissprot - F8W910
swissprot - A0A024R2U6
swissprot - C9J9P7
swissprot - C9JFQ5
swissprot - C9JR02
Ensembl - ENSG00000003756
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbm5ENSDARG00000098280Danio rerio
 RBM5ENSGALG00000039288Gallus gallus
 Rbm5ENSMUSG00000032580Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RBM10 / P98175 / RNA binding motif protein 10ENSG0000018287255
RBM6 / P78332 / RNA binding motif protein 6ENSG0000000453429


Protein motifs (from Interpro)
Interpro ID Name
 IPR000467  G-patch domain
 IPR000504  RNA recognition motif domain
 IPR001876  Zinc finger, RanBP2-type
 IPR013087  Zinc finger C2H2-type
 IPR033094  RNA-binding protein 5
 IPR034991  RNA-binding protein 5, RNA recognition motif 1
 IPR034993  RNA-binding protein 5, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily
 IPR036443  Zinc finger, RanBP2-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000245 spliceosomal complex assembly IDA
 biological_processGO:0000381 regulation of alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006396 RNA processing TAS
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0008285 negative regulation of cell proliferation TAS
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0043065 positive regulation of apoptotic process TAS
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding TAS
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003729 mRNA binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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