ENSG00000005175


Homo sapiens

Features
Gene ID: ENSG00000005175
  
Biological name :RPAP3
  
Synonyms : Q9H6T3 / RNA polymerase II associated protein 3 / RPAP3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.11
Gene start: 47661249
Gene end: 47706061
  
Corresponding Affymetrix probe sets: 1557984_s_at (Human Genome U133 Plus 2.0 Array)   218842_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000005386
Ensembl peptide - ENSP00000370024
Ensembl peptide - ENSP00000401823
NCBI entrez gene - 79657     See in Manteia.
OMIM - 611477
RefSeq - XM_011538741
RefSeq - NM_001146075
RefSeq - NM_001146076
RefSeq - NM_024604
RefSeq Peptide - NP_001139548
RefSeq Peptide - NP_078880
RefSeq Peptide - NP_001139547
swissprot - Q9H6T3
Ensembl - ENSG00000005175
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpap3ENSDARG00000087962Danio rerio
 RPAP3ENSGALG00000009743Gallus gallus
 Rpap3ENSMUSG00000022466Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SPAG1 / Q07617 / sperm associated antigen 1ENSG0000010445023
Q9H3U1 / UNC45A / unc-45 myosin chaperone AENSG0000014055316
Q8IWX7 / UNC45B / unc-45 myosin chaperone BENSG0000014116115
O94826 / TOMM70 / translocase of outer mitochondrial membrane 70ENSG0000015417415
Q15785 / TOMM34 / translocase of outer mitochondrial membrane 34ENSG0000002577212
TTC1 / Q99614 / tetratricopeptide repeat domain 1ENSG0000011331211


Protein motifs (from Interpro)
Interpro ID Name
 IPR001440  Tetratricopeptide repeat 1
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat
 IPR025986  RNA-polymerase II-associated protein 3-like, C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0097255 R2TP complex IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr