ENSG00000007255


Homo sapiens

Features
Gene ID: ENSG00000007255
  
Biological name :TRAPPC6A
  
Synonyms : O75865 / trafficking protein particle complex 6A / TRAPPC6A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: q13.32
Gene start: 45162928
Gene end: 45178237
  
Corresponding Affymetrix probe sets: 204985_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000468612
Ensembl peptide - ENSP00000006275
Ensembl peptide - ENSP00000468182
Ensembl peptide - ENSP00000468363
NCBI entrez gene - 79090     See in Manteia.
OMIM - 610396
RefSeq - XM_017027295
RefSeq - NM_001270891
RefSeq - NM_001270892
RefSeq - NM_001270893
RefSeq - NM_024108
RefSeq Peptide - NP_001257820
RefSeq Peptide - NP_001257821
RefSeq Peptide - NP_001257822
RefSeq Peptide - NP_077013
swissprot - O75865
swissprot - B7TZ90
Ensembl - ENSG00000007255
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trappc6blENSDARG00000033171Danio rerio
 Q78XR0ENSMUSG00000002043Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86SZ2 / TRAPPC6B / trafficking protein particle complex 6BENSG0000018240051


Protein motifs (from Interpro)
Interpro ID Name
 IPR007194  Transport protein particle (TRAPP) component
 IPR024096  NO signalling/Golgi transport ligand-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport IBA
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0043087 regulation of GTPase activity IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0048193 Golgi vesicle transport IEA
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:1903232 melanosome assembly IBA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005801 cis-Golgi network IBA
 cellular_componentGO:0005802 trans-Golgi network IBA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030008 TRAPP complex IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017112 Rab guanyl-nucleotide exchange factor activity TAS


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
RAB GEFs exchange GTP for GDP on RABs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr