ENSG00000048140


Homo sapiens

Features
Gene ID: ENSG00000048140
  
Biological name :TSPAN17
  
Synonyms : Q96FV3 / tetraspanin 17 / TSPAN17
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q35.2
Gene start: 176647387
Gene end: 176659054
  
Corresponding Affymetrix probe sets: 1558119_at (Human Genome U133 Plus 2.0 Array)   225235_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422053
Ensembl peptide - ENSP00000426650
Ensembl peptide - ENSP00000425975
Ensembl peptide - ENSP00000425212
Ensembl peptide - ENSP00000423957
Ensembl peptide - ENSP00000423610
Ensembl peptide - ENSP00000298564
Ensembl peptide - ENSP00000309036
NCBI entrez gene - 26262     See in Manteia.
RefSeq - XM_005265876
RefSeq - NM_001006616
RefSeq - NM_012171
RefSeq - NM_130465
RefSeq Peptide - NP_569732
RefSeq Peptide - NP_001006617
RefSeq Peptide - NP_036303
swissprot - Q96FV3
swissprot - D6RI03
swissprot - D6RDX8
swissprot - D6RBW9
swissprot - A0A024R7Q6
swissprot - A0A024R7R2
swissprot - H0Y9A5
swissprot - J3KNG2
Ensembl - ENSG00000048140
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tspan17ENSDARG00000114067Danio rerio
 Tspan17ENSMUSG00000025875Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P62079 / TSPAN5 / tetraspanin 5ENSG0000016878564
Q8NG11 / TSPAN14 / tetraspanin 14ENSG0000010821947
Q86UF1 / TSPAN33 / tetraspanin 33ENSG0000015845736
TSPAN10 / tetraspanin 10ENSG0000018261228
O95858 / TSPAN15 / tetraspanin 15ENSG0000009928226
P41732 / TSPAN7 / tetraspanin 7ENSG0000015629822
CD151 / P48509 / CD151 molecule (Raph blood group)ENSG0000017769721
CD63 / P08962 / CD63 moleculeENSG0000013540421
A1L157 / TSPAN11 / tetraspanin 11ENSG0000011090021
O43657 / TSPAN6 / tetraspanin 6ENSG0000000000320
AF241726.2ENSG0000025034920
O60637 / TSPAN3 / tetraspanin 3ENSG0000014039116


Protein motifs (from Interpro)
Interpro ID Name
 IPR000301  Tetraspanin
 IPR008952  Tetraspanin, EC2 domain superfamily
 IPR018499  Tetraspanin/Peripherin
 IPR018503  Tetraspanin, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007166 cell surface receptor signaling pathway IBA
 biological_processGO:0016567 protein ubiquitination NAS
 biological_processGO:0072594 establishment of protein localization to organelle IDA
 cellular_componentGO:0000151 ubiquitin ligase complex NAS
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity NAS
 molecular_functionGO:0019899 enzyme binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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