ENSG00000055044


Homo sapiens

Features
Gene ID: ENSG00000055044
  
Biological name :NOP58
  
Synonyms : NOP58 / NOP58 ribonucleoprotein / Q9Y2X3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q33.1
Gene start: 202265716
Gene end: 202303666
  
Corresponding Affymetrix probe sets: 223096_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000388126
Ensembl peptide - ENSP00000388905
Ensembl peptide - ENSP00000264279
NCBI entrez gene - 51602     See in Manteia.
OMIM - 616742
RefSeq - NM_015934
RefSeq Peptide - NP_057018
swissprot - Q9Y2X3
swissprot - F8WED0
swissprot - H7BZ72
Ensembl - ENSG00000055044
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nop58ENSDARG00000104353Danio rerio
 NOP58ENSGALG00000008454Gallus gallus
 Nop58ENSMUSG00000026020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002687  Nop domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR012974  NOP5, N-terminal
 IPR012976  NOSIC
 IPR036070  Nop domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0016049 cell growth TAS
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0048254 snoRNA localization IMP
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005732 small nucleolar ribonucleoprotein complex IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0015030 Cajal body IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0031428 box C/D snoRNP complex NAS
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0070761 pre-snoRNP complex IDA
 molecular_functionGO:0001094 TFIID-class transcription factor binding IPI
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030515 snoRNA binding IDA
 molecular_functionGO:0051117 ATPase binding IPI


Pathways (from Reactome)
Pathway description
SUMOylation of RNA binding proteins
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000103275 UBE2I / P63279 / ubiquitin conjugating enzyme E2 I  / reaction
 ENSG00000116030 SUMO1 / P63165 / small ubiquitin-like modifier 1  / reaction / complex
 ENSG00000188612 SUMO2 / P61956 / small ubiquitin-like modifier 2  / reaction






 

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