ENSMUSG00000026020


Mus musculus

Features
Gene ID: ENSMUSG00000026020
  
Biological name :Nop58
  
Synonyms : Nop58 / Nucleolar protein 58 / Q6DFW4
  
Possible biological names infered from orthology : NOP58 ribonucleoprotein / Q9Y2X3
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: C2
Gene start: 59684971
Gene end: 59719044
  
Corresponding Affymetrix probe sets: 10346634 (MoGene1.0st)   1450986_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000027174
Ensembl peptide - ENSMUSP00000141192
Ensembl peptide - ENSMUSP00000141100
Ensembl peptide - ENSMUSP00000140581
Ensembl peptide - ENSMUSP00000140250
Ensembl peptide - ENSMUSP00000140053
Ensembl peptide - ENSMUSP00000140038
Ensembl peptide - ENSMUSP00000139568
Ensembl peptide - ENSMUSP00000139517
Ensembl peptide - ENSMUSP00000139474
NCBI entrez gene - 55989     See in Manteia.
MGI - MGI:1933184
RefSeq - NM_018868
RefSeq - XM_006496149
RefSeq Peptide - NP_061356
swissprot - A0A087WQ59
swissprot - A0A087WQ46
swissprot - A0A087WP00
swissprot - A0A0A0MQ76
swissprot - A0A087WNS6
swissprot - Q6DFW4
swissprot - A0A087WNW0
swissprot - A0A087WSU5
swissprot - A0A087WSL8
swissprot - A0A087WRD9
Ensembl - ENSMUSG00000026020
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nop58ENSDARG00000104353Danio rerio
 NOP58ENSGALG00000008454Gallus gallus
 NOP58ENSG00000055044Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002687  Nop domain
 IPR012974  NOP5, N-terminal
 IPR012976  NOSIC
 IPR036070  Nop domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IBA
 biological_processGO:0042254 ribosome biogenesis IEA
 biological_processGO:0048254 snoRNA localization IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005732 small nucleolar ribonucleoprotein complex IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0031428 box C/D snoRNP complex IBA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0070761 pre-snoRNP complex IEA
 molecular_functionGO:0001094 TFIID-class transcription factor binding IEA
 molecular_functionGO:0030515 snoRNA binding IEA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of RNA binding proteins
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000026021 Sumo1 / P63166 / Small ubiquitin-related modifier 1 / P63165* / small ubiquitin-like modifier 1*  / complex / reaction
 ENSMUSG00000015120 Ube2i / P63280 / ubiquitin-conjugating enzyme E2I / P63279*  / reaction






 

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