ENSGALG00000008454


Gallus gallus

Features
Gene ID: ENSGALG00000008454
  
Biological name :NOP58
  
Synonyms : NOP58 / NOP58 ribonucleoprotein
  
Possible biological names infered from orthology : Nucleolar protein 58 / Q6DFW4 / Q9Y2X3
  
Species: Gallus gallus
  
Chr. number: 7
Strand: 1
Band:
Gene start: 11829700
Gene end: 11853135
  
Corresponding Affymetrix probe sets: Gga.12235.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013761
NCBI entrez gene - 424087     See in Manteia.
RefSeq - XM_421942
swissprot - E1BUS2
Ensembl - ENSGALG00000008454
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nop58ENSDARG00000104353Danio rerio
 NOP58ENSG00000055044Homo sapiens
 Nop58ENSMUSG00000026020Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002687  Nop domain
 IPR012974  NOP5, N-terminal
 IPR012976  NOSIC


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000154 rRNA modification IBA
 biological_processGO:0048254 snoRNA localization IEA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005732 small nucleolar ribonucleoprotein complex IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0031428 box C/D snoRNP complex IBA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0070761 pre-snoRNP complex IEA
 molecular_functionGO:0001094 TFIID-class transcription factor binding IEA
 molecular_functionGO:0030515 snoRNA binding IEA
 molecular_functionGO:0051117 ATPase binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of RNA binding proteins
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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