ENSG00000070061


Homo sapiens

Features
Gene ID: ENSG00000070061
  
Biological name :ELP1
  
Synonyms : elongator complex protein 1 / ELP1 / O95163
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q31.3
Gene start: 108867517
Gene end: 108934116
  
Corresponding Affymetrix probe sets: 202490_at (Human Genome U133 Plus 2.0 Array)   202491_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363779
Ensembl peptide - ENSP00000433514
Ensembl peptide - ENSP00000439367
NCBI entrez gene - 8518     See in Manteia.
OMIM - 603722
RefSeq - XM_017015238
RefSeq - NM_001318360
RefSeq - NM_003640
RefSeq - XM_011519136
RefSeq - XM_011519137
RefSeq Peptide - NP_001317678
RefSeq Peptide - NP_003631
RefSeq Peptide - NP_001305289
swissprot - H0YDF3
swissprot - O95163
swissprot - F5H2T0
Ensembl - ENSG00000070061
  
Related genetic diseases (OMIM): 223900 - Dysautonomia, familial, 223900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elp1ENSDARG00000094204Danio rerio
 ELP1ENSGALG00000001947Gallus gallus
 IkbkapENSMUSG00000028431Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006849  Elongator complex protein 1
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006368 transcription elongation from RNA polymerase II promoter TAS
 biological_processGO:0006468 protein phosphorylation TAS
 biological_processGO:0006955 immune response TAS
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0030335 positive regulation of cell migration IEA
 biological_processGO:0045859 regulation of protein kinase activity IEA
 biological_processGO:0065003 protein-containing complex assembly TAS
 cellular_componentGO:0000123 histone acetyltransferase complex IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0008023 transcription elongation factor complex IDA
 cellular_componentGO:0033588 Elongator holoenzyme complex IEA
 molecular_functionGO:0000993 RNA polymerase II core binding IDA
 molecular_functionGO:0004871 obsolete signal transducer activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008607 phosphorylase kinase regulator activity TAS


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000083 Renal failure 
Show

 HP:0000096 Glomerulosclerosis 
Show

 HP:0000224 Decreased taste sensation 
Show

 HP:0000495 Recurrent corneal erosions "The presence of recurrent corneal epithelial erosions. Although most corneal epithelial defects heal quickly, some may show recurrent ulcerations." [HPO:curators]
Show

 HP:0000522 Alacrima 
Show

 HP:0000545 Myopia 
Show

 HP:0000615 Abnormality of the pupils 
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000708 Behavioural/Psychiatric Abnormality 
Show

 HP:0000712 Emotional lability 
Show

 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
Show

 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
Show

 HP:0000975 Hyperhidrosis "An abnormally increased perspiration." [HPO:probinson]
Show

 HP:0001063 Acrocyanosis 
Show

 HP:0001069 Hyperhidrosis, episodic 
Show

 HP:0001100 Heterochromia iridis "Heterochromia iridis is a difference in the color of the iris in the two eyes." [HPO:curators]
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001265 Hyporeflexia 
Show

 HP:0001278 Orthostatic hypotension "A form of hypotension characterized by a sudden fall in blood pressure that occurs when a person assumes a standing position." [HPO:curators]
Show

 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001510 Growth retardation 
Show

 HP:0001649 Tachycardia "A rapid heartrate that exceeds the range of the normal resting heartrate for age." [HPO:curators]
Show

 HP:0001954 Fever, episodic "Periodic (episodic or recurrent) bouts of fever that do not have an infectious cause." [HPO:curators]
Show

 HP:0002013 Vomiting 
Show

 HP:0002014 Diarrhea 
Show

 HP:0002019 Constipation 
Show

 HP:0002020 Gastroesophageal reflux 
Show

 HP:0002047 Malignant hyperthermia "Malignant hyperthermia is characterized by a rapid increase in temperature to 39-42 degrees C in response to inhalational anesthetics such as halothane or to muscle relaxants such as succinylcholine." [HPO:curators]
Show

 HP:0002103 Abnormality of the pleura "An abnormality of the pleura, the thin, transparent membrane which covers the lungs and lines the inside of the chest walls." [HPO:curators]
Show

 HP:0002205 Recurrent respiratory infections 
Show

 HP:0002311 Incoordination 
Show

 HP:0002585 Abnormality of the peritoneum 
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
Show

 HP:0002797 Osteolysis 
Show

 HP:0002821 Neuropathic arthropathy 
Show

 HP:0002902 Hyponatremia 
Show

 HP:0003138 Increased blood urea nitrogen (BUN) 
Show

 HP:0003259 Increased creatinine 
Show

 HP:0003387 Loss of large myelinated fibers 
Show

 HP:0003457 Abnormal EMG findings "Abnormal results of investigations using electromyography (EMG)." [HPO:curators]
Show

 HP:0003577 Onset at birth 
Show

 HP:0003676 Progressive disorder 
Show

 HP:0004891 Recurrent infections due to aspiration 
Show

 HP:0005947 Decreased sensitivity to hypoxemia 
Show

 HP:0007328 Decreased pain sensation "Reduced ability to perceive painful stimuli." [HPO:curators]
Show

 HP:0007957 Variable degree of corneal opacities 
Show

 HP:0008000 Decreased corneal reflex 
Show

 HP:0008872 Feeding problems in infancy 
Show

 HP:0010885 Aseptic necrosis "A disease where there is cellular death (necrosis) of bone components due to interruption of the blood supply." [HPO:sdoelken]
Show

 HP:0012211 Abnormal renal physiology "Any functional anomaly of the `kidney` (FMA:7203)." [HPO:probinson]
Show

 HP:0012804 Corneal ulceration "Disruption of the epithelial layer of the cornea with involvement of the underlying stroma." [HPO:probinson]
Show

 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
Show

 HP:0200020 Corneal erosions "Erosions or Abbrasions of the cornea s outermost layer of epithelial cells." [HPO:sdoelken]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000134014 ELP3 / Q9H9T3 / elongator acetyltransferase complex subunit 3  / complex
 ENSG00000134759 ELP2 / Q6IA86 / elongator acetyltransferase complex subunit 2  / complex
 ENSG00000276180 P62805 / HIST1H4I / histone cluster 1 H4 family member i  / reaction
 ENSG00000109911 ELP4 / Q96EB1 / elongator acetyltransferase complex subunit 4  / complex
 ENSG00000163832 ELP6 / Q0PNE2 / elongator acetyltransferase complex subunit 6  / complex
 ENSG00000170291 ELP5 / Q8TE02 / elongator acetyltransferase complex subunit 5  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr