ENSG00000076043


Homo sapiens

Features
Gene ID: ENSG00000076043
  
Biological name :REXO2
  
Synonyms : Q9Y3B8 / REXO2 / RNA exonuclease 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q23.2
Gene start: 114439386
Gene end: 114450279
  
Corresponding Affymetrix probe sets: 218194_at (Human Genome U133 Plus 2.0 Array)   223989_s_at (Human Genome U133 Plus 2.0 Array)   233613_x_at (Human Genome U133 Plus 2.0 Array)   239616_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444421
Ensembl peptide - ENSP00000480535
Ensembl peptide - ENSP00000265881
Ensembl peptide - ENSP00000437380
Ensembl peptide - ENSP00000437460
Ensembl peptide - ENSP00000440665
Ensembl peptide - ENSP00000441639
Ensembl peptide - ENSP00000441844
Ensembl peptide - ENSP00000442380
Ensembl peptide - ENSP00000442703
Ensembl peptide - ENSP00000443842
NCBI entrez gene - 25996     See in Manteia.
OMIM - 607149
RefSeq - NM_015523
RefSeq Peptide - NP_056338
swissprot - F5H784
swissprot - F5H7P1
swissprot - H0YF66
swissprot - H0YG37
swissprot - H0YG54
swissprot - H0YGR4
swissprot - Q9BTR4
swissprot - Q9Y3B8
swissprot - F5GYG5
swissprot - F5H6P8
Ensembl - ENSG00000076043
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 smfnENSDARG00000009806Danio rerio
 REXO2ENSGALG00000035980Gallus gallus
 Rexo2ENSMUSG00000032026Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily
 IPR013520  Exonuclease, RNase T/DNA polymerase III
 IPR022894  Oligoribonuclease
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006139 nucleobase-containing compound metabolic process IDA
 biological_processGO:0009117 nucleotide metabolic process TAS
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005758 mitochondrial intermembrane space IEA
 cellular_componentGO:0005759 mitochondrial matrix IEA
 cellular_componentGO:0005925 focal adhesion IDA
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0008408 3"-5" exonuclease activity IDA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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